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Extra Credit Unit 2 Topics: MCB 229 Spring 2000
  • Assignment Write a short paper on some aspect of "Microbes and the Environment". Microbes are found in every habitat: deserts, lakes, soils, atmospheric dust, etc. They are responsible for an enormous variety of processes: mineral cycling (e.g., conversion of atmospheric nitrogen, N2, into ammonia, bioremediation (e.g., the degradation of oil and toxic chemicals into harmless products), bioengineering (production of desired products), and much more. Microbial activities are harnessed by humans to accomplish many enviromental transformations: sewage treatment, microbial "mining" to extract certain chemicals from ores, fermentation to produce foods and beverages, etc.

    Choose one topic featuring a particular microbe, microbial habitat, or microbial process in relation to the environment. Write a short essay on the topic, with your own illustrations wherever appropriate. Use the index in your text as a starting point. Also browse chapters 40-44 in your text for ideas.

    Do not choose a topic involving microbial diseases for this topic -- that will be the focus of extra credit paper #3.

  • Some Sample topics The following are only a few possible suggestions. I list them because they might otherwise escape your notice.

    Survival of microbes in rocks
    The recent discovery of possible microbial remains in Martian rocks (found as meteors on Earth) has galvanized interest in the study of terrestrial microbes in rocks. Viable bacteria have been found in rocks from deserts, and in subterranean rocks taken from core samples 1 mile or deeper. How do they survive? How did they get there? An interesting topic. Start with the article: "Looking for Life in All the Wrong Places" by Will Hively. (DISCOVER MAGAZINE - MAY 1997). Note: this article is available on-line.

    Microbial Life in Hydrothermal vent communities .
    The discovery of abundant communities of organisms growing around deep-sea hydrothermal vents is a remarkable one. The source of energy for this community is not light but reduced molecules such as hydrogen sulfide. Chemolithotrophic bacteria "eat" the sulfide and, are in turn eaten by other organisms of the community. See box 40.4 (p. 847) and box 6.1 (p. 128) in your text for an introduction to this topic.

    Microbial Leaching of Ores
    Concentrating certain minerals (e.g. Copper) from low-grade ores can be too expensive to be practical by conventional smelting technology. An alternative, if the minerals contain sulfide, is to use bacteria to "mine" the ore. See pp. 955-956 in your text for an introduction to this topic.

    Methanogenesis and Global Warming.
    Methane is a significant greenhouse gas, and contributes to global warming. Methanogenic bacteria are a major source of this gas, with cows providing the single largest source. Investigate the numbers and the trends of this phenomenon, and find out for yourself the magnitude of the situation. Include some description of the biological process by which methane is formed. See p. 433 and box 42.3 (p.904) in your text for an introduction to this topic.

    Dynamics of the Nitrogen Cycle .
    Nitrogen is one of the macroelements required by all life-forms. Its chemistry is complicated by having many different forms that can be interconverted by different aerobic and anaerobic processes, both biotic and abiotic. Investigate the numbers involved -- come up with some graphical or tabular way of illustrating accurately how these various fluxes occur, and why. See pp. 836-839 in your text for an introduction to this topic.

    Biodegradation of Xenobiotics .
    Xenobiotics are chemicals synthesized by human design that did not evolve naturally. Such chemicals may accumulate as pollutants in the environment, because microbes have not had time to evolve chemical pathways for degradation. But some such chemicals can be degraded, and there is strong interest in the mechanisms involved. See box 44.2 (p.955) in your text for an introduction to this topic.

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Last revised: Monday, February 14, 2000